CDS

Accession Number TCMCG057C28678
gbkey CDS
Protein Id XP_018490385.1
Location complement(join(39827529..39827693,39827795..39827871,39827970..39828016,39828152..39828252,39828405..39828497,39828663..39829481,39829483..39830028,39830030..39830329))
Gene LOC108861053
GeneID 108861053
Organism Raphanus sativus

Protein

Length 715aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018634883.1
Definition PREDICTED: LOW QUALITY PROTEIN: B3 domain-containing transcription factor ABI3-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description B3 DNA binding domain
KEGG_TC -
KEGG_Module M00019        [VIEW IN KEGG]
M00570        [VIEW IN KEGG]
KEGG_Reaction R00006        [VIEW IN KEGG]
R00014        [VIEW IN KEGG]
R00226        [VIEW IN KEGG]
R03050        [VIEW IN KEGG]
R04672        [VIEW IN KEGG]
R04673        [VIEW IN KEGG]
R08648        [VIEW IN KEGG]
KEGG_rclass RC00027        [VIEW IN KEGG]
RC00106        [VIEW IN KEGG]
RC01192        [VIEW IN KEGG]
RC02744        [VIEW IN KEGG]
RC02893        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01653        [VIEW IN KEGG]
EC 2.2.1.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00290        [VIEW IN KEGG]
ko00650        [VIEW IN KEGG]
ko00660        [VIEW IN KEGG]
ko00770        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01210        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00290        [VIEW IN KEGG]
map00650        [VIEW IN KEGG]
map00660        [VIEW IN KEGG]
map00770        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01210        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000988        [VIEW IN EMBL-EBI]
GO:0000989        [VIEW IN EMBL-EBI]
GO:0001076        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031930        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAAAGCTTGCATGTGGAGGCGAACGGAGGAGATCTGGCTGAAGATTGTGGAATACTCGCCGGAGGCAGTGATGAGGCTGTTTTGATGGATGGAATGGGTGAGGTCGGTAGAGAGATCTGGCTAGATAACCATGAAGGAGACCATGGTCATGGTCATCGAGAAGATGATGATATAATTGTTCACCATGACCCTTCAATGTTCTACGGAGATCTACCAACACTCCCTGACTTCCCATGCATGTCATCATCTTCATCATCTTCAACATCTCCAGCTCCTGTCAACGCCATCGTCTCCTCAGCCTCTTCCTCTTCCGCAGCCTCTTCCTCAACTTCCTCGGCTGCTTCTTGGGCTATATTGAAATCAGACGGTGAAGATCCGACGACTCAGAATCAAAACCAGTACGCATCGGGAAACTGCGATGTCGAGTCTTCAGCCGCACTACAGTCCACTGCTTCCATGGAGATTCCGTTGGATAGTACTCAAGGTTTTGGTTGCGGCGAAGGCGGTGGTGATTGCATTGACATGATGGAGACTTTCGGGTACATGGATCTACTCGATAGCAATGAGTTCTTTGATACTTCAGCCATCTTTAACCAAGACGAGGACACGCAAAACCCTAACTTGATGGAGCAAGCGCTGGAGAGAAAAGACCAGGTCGTTATTCCAGTTATGGAGAATAATAACAGTACTGAAGGAGACATGCAGATGATGAACCCTCCGTTGGAACAAGAGGATGATCTTGCGGGAGTGTTCTTGGAGTGGCTGAAGAACAACAAGGAGACGGTTTCAGCTGATGATTTGAGGAAAGTGAAGATAAAGAAAGCTACTATTGAATCAGCAGCTAAAAGGTTAGGCGGTGGGAAAGAAGCGATGAAACAGCTTTTGAAGCTGATTCTTGAATGGGTCCAAACCAATCACCTACAAAGAAGACGCACCAACGATCTCTCATATCAACAAGATCCGTTTCAAAATCCTAACCTACTCCCACCGTCTGATCAAACATGTTTCTCACCTTCCACATGGGTTCCGCCTCCTCCTCAGCCACCACCACCACCACCACCACCACCACAACAACAGGCTTTTGTTTCGGATCCGGGTTTTGGATACATGCCTGCTCCAAATTATCCGTCTCAAGAATATTTTCCATCACTCGAATCTCCACCGACGTGGCCACCACCACCACAGTCTGGTCCCATGCCACTTCAGCAATTCACTATGCCAAACCCTCAGTATACTCCATTTCAAGACCCTGGAGGTGGTTTCACAGGATACAACATGAATCCATATCAATATCCTTATCTTCCTTCTTCCGGACAGATGAGAGATCAGGGATTGCTTCGTTTGTGTTCCTCAGCTACTAAAGAGGCAAGAAAGAAAAGGATGGCGAGACAGAGGAGGTTCTTGTCTCACCACCATAGACACAACAACAATCAGCAGAACCAAACTCAAATCGGAGAAGGCTGTGGTGCTGTGGATCCTCAGCTTAACCATGTACCTACTACAGCCACGGGCGGGACTTGGATGTATTGGCCTAATGTCCCTACCATGCCACCGACGGTCTCATCTCAACTACCGGCGATGGAGACTCAGTTGCCCACCATGGACCGAGCTGGCTCTTCTTCTGTTATGCCACGTCAGCAGGTGGTACCAGATCGCCGGCAGGGATGGAAACCAGAAAAGAACTTGAGGTTTCTCTTGCAGAAAGTGTTGAAGCAAAGCGACGTGGGTAACCTCGGAAGAATCGTCTTGCCAAAAAAAGAAGCTGAGACGCATTTGCCGGAGCTGGAGGCAAGAGACGGCATCTCTTTGGCCATGGAAGACATTGGAACCTCTCGTGTTTGGAACCTGCGCTATAGATTTTGGCCGAACAACAAAAGTAGGATGTATCTCCTCGAAAACACCGGCGATTTTGTGAAAACAAATGGGCTCCAAGAAGGTGACTTCATAGTCATATACTCCGATGTCAAATGTGGAAAATATTTGATACGAGGGGTTAAAGTAAGGCAACCGGCGGGACAAAAGCTAGAGGCTACGTCGTCCTCAGCAGCTGTAACGAAGAGACAAAGCAAGTCGCAGAGGAGCATTAACAACAACTCTCCGTCAGCAAATATAGTCGCTTCACCAACTTCTCAAGCAGTTAAATGA
Protein:  
MKSLHVEANGGDLAEDCGILAGGSDEAVLMDGMGEVGREIWLDNHEGDHGHGHREDDDIIVHHDPSMFYGDLPTLPDFPCMSSSSSSSTSPAPVNAIVSSASSSSAASSSTSSAASWAILKSDGEDPTTQNQNQYASGNCDVESSAALQSTASMEIPLDSTQGFGCGEGGGDCIDMMETFGYMDLLDSNEFFDTSAIFNQDEDTQNPNLMEQALERKDQVVIPVMENNNSTEGDMQMMNPPLEQEDDLAGVFLEWLKNNKETVSADDLRKVKIKKATIESAAKRLGGGKEAMKQLLKLILEWVQTNHLQRRRTNDLSYQQDPFQNPNLLPPSDQTCFSPSTWVPPPPQPPPPPPPPPQQQAFVSDPGFGYMPAPNYPSQEYFPSLESPPTWPPPPQSGPMPLQQFTMPNPQYTPFQDPGGGFTGYNMNPYQYPYLPSSGQMRDQGLLRLCSSATKEARKKRMARQRRFLSHHHRHNNNQQNQTQIGEGCGAVDPQLNHVPTTATGGTWMYWPNVPTMPPTVSSQLPAMETQLPTMDRAGSSSVMPRQQVVPDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNLRYRFWPNNKSRMYLLENTGDFVKTNGLQEGDFIVIYSDVKCGKYLIRGVKVRQPAGQKLEATSSSAAVTKRQSKSQRSINNNSPSANIVASPTSQAVK